Input/Output Functions

These functions handle input and output operations for BandHiC matrices, including saving and loading from various formats.

bandhic.save_npz(file_name, mat)	Save a band_hic_matrix to a .npz file.
bandhic.load_npz(file_name)	Load a band_hic_matrix from a .npz file.
bandhic.straw_chr(hic_file, chrom, ...[, ...])	Read Hi-C data from a .hic file and return a band_hic_matrix.
bandhic.straw_all_chrs(hic_file, resolution, ...)	Read Hi-C data from a .hic file for all chromosomes and return a dictionary of band_hic_matrix objects.
bandhic.cooler_chr(file_path, chrom, diag_num)	Read Hi-C data from a .cool or .mcool file and return a band_hic_matrix.
bandhic.cooler_all_chrs(file_path, diag_num)	Read Hi-C data from a .cool or .mcool file for all chromosomes and return a dictionary of band_hic_matrix objects.
bandhic.cooler_chr_all_cells(file_path, ...)	Read Hi-C data from a .scool file for a specific chromosome and return a dictionary of band_hic_matrix objects for all cells.
bandhic.cooler_all_cells_all_chrs(file_path, ...)	Read Hi-C data from a .scool file for all cells and return a dictionary of dictionaries of band_hic_matrix objects.